Index of /~jj/Publications

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]d_rt_for_networks9_Algorithmica_2021.pdf2021-05-27 15:12 6.5M 
[ ]MinPPI3_supplement_PLOS_ONE_2018.pdf2018-04-28 06:39 5.9M 
[ ]normalized_link_prediction10_supplement.pdf2022-06-17 14:15 4.5M 
[ ]normalized_link_prediction10_BMC_Bio_2023.pdf2023-02-22 15:26 4.4M 
[ ]MinPPI3_PLOS_ONE_2018.pdf2018-04-28 06:39 3.0M 
[ ]graph_orient_degree-constrained7_TOCS_2016.pdf2016-01-12 03:00 1.7M 
[ ]d_rt_for_trees7_JCB_2017.pdf2017-02-12 04:45 1.6M 
[ ]faster_R_star_c_t7_Algorithmica_2016.pdf2016-11-04 05:27 1.6M 
[ ]fan_consistency6_JCB_2018.pdf2018-07-17 14:51 1.5M 
[ ]taxonomic_assignment8_BMC_Bio_2011.pdf2011-01-24 09:19 1.5M 
[ ]frequency_difference_c_t6_TCBB_2018.pdf2018-02-09 11:13 1.3M 
[ ]d_rt_for_galled_via_trees6_JCB_2019.pdf2019-09-12 15:04 1.2M 
[ ]PhD_thesis.pdf2003-03-10 16:56 1.2M 
[ ]unordered_tree_incl4_TKDE_2015.pdf2015-11-09 08:17 1.1M 
[ ]MUL-tree_pruning4_CPM_2023.pdf2023-06-21 08:45 1.1M 
[ ]normalized_link_prediction5_IEEE_BIBE_2020.pdf2020-10-30 06:08 1.0M 
[ ]MICT10_COCOON1997.pdf2007-02-21 02:53 1.0M 
[ ]sbgc3.ps2002-12-15 18:28 1.0M 
[ ]faster_freq_diff_c_t4_STACS_2024.pdf2024-03-11 09:48 969K 
[ ]consensus_MUL-trees5_JCB_2012.pdf2012-09-13 02:39 962K 
[ ]PhD_thesis.ps.Z2003-03-03 11:02 903K 
[ ]population_protocols_labeling8_OPODIS_2021.pdf2022-02-28 11:42 883K 
[ ]graph_orient_min_sum_penalty6_TCS_2022.pdf2021-12-22 06:53 837K 
[ ]similarsubforest9_TOCS_2011.pdf2011-03-07 05:39 820K 
[ ]longest_run_subsequence3_CPM_2023.pdf2023-06-21 08:45 816K 
[ ]LCS_variants4_CPM_2022.pdf2022-06-22 14:45 808K 
[ ]q-Resolved_MAXRTC10_Inform_Comput_2023.pdf2023-09-12 10:29 805K 
[ ]improved_consensus_trees6_JACM_2016.pdf2016-06-20 08:21 795K 
[ ]Thesis.ps1996-01-30 02:18 739K 
[ ]online_square9_IJFCS2007.pdf2007-06-21 02:48 719K 
[ ]mmoutdegr10_JOCO_2011.pdf2011-06-10 08:47 717K 
[ ]taxonomic_assignment4_PSB_2010.pdf2010-01-05 07:04 702K 
[ ]fan_consistency5_SHORT_Cell_Systems_2017.pdf2018-05-07 03:33 698K 
[ ]R_star_consensus5_Algorithmica_2013.pdf2013-03-15 03:18 691K 
[ ]Adams_consensus_tree4_STACS_2015.pdf2015-03-02 05:23 667K 
[ ]dyn_tries12_Algorithmica_2015.pdf2015-03-10 02:39 664K 
[ ]MaxRTC6_DAM_2010.pdf2010-05-07 03:31 653K 
[ ]rectangulations_matr_mult5_Algorithmica_2018.pdf2018-01-04 07:47 652K 
[ ]approx_MTC6_DAM_2019.pdf2019-03-03 12:05 627K 
[ ]Adams_consensus_tree7_Inform_Comput_2017.pdf2017-09-26 17:24 620K 
[ ]graph_orient_min_sum_penalty2_CATS_2012.pdf2012-02-02 12:06 595K 
[ ]dist_ugn7_JBCB2006.pdf2006-10-28 05:57 593K 
[ ]local_c_t7_MFCS_2016.pdf2016-08-23 17:21 589K 
[ ]congested_clique_convex_hull3_CCCG_2023.pdf2023-07-30 14:50 580K 
[ ]q-Resolved_MAXRTC6_WABI_2019.pdf2019-09-04 03:40 575K 
[ ]unification_assoc_commutative6_TCS_2017.pdf2017-01-09 08:52 571K 
[ ]new_unordered_tree_inclusion10_TCS_2021.pdf2021-08-18 04:33 570K 
[ ]reads-taxonomy_GIW2009.pdf2010-01-05 04:54 570K 
[ ]graph_orient_w_edge_mod9_IJFCS_2021.pdf2021-02-25 15:59 566K 
[ ]indexing_via_reference11_TCS_2014.pdf2014-06-30 04:05 553K 
[ ]FCT_2019_proceedings_preface.pdf2021-03-18 07:26 547K 
[ ]STCON2.ps1999-01-04 13:36 545K 
[ ]similarsubforest4_CPM2006.pdf2006-07-11 04:10 545K 
[ ]LCS_variants6_DAM_2024.pdf2024-04-19 02:26 542K 
[ ]mecp7_IJFCS2007.pdf2009-02-20 06:00 541K 
[ ]new_unordered_tree_inclusion5_ISAAC_2018.pdf2018-11-27 11:07 531K 
[ ]MaxRTC4_ISAAC2008.pdf2009-01-27 09:43 531K 
[ ]d_rt_for_trees3_AlCoB_2015.pdf2015-08-01 11:50 523K 
[ ]mmoutdegr6_AAIM2007.pdf2007-07-17 06:37 522K 
[ ]congested_clique_convex_hull6_arXiv.pdf2023-11-29 08:59 516K 
[ ]local_c_t10_AIMS_Medical_Science_2018.pdf2018-05-15 05:51 515K 
[ ]connectivity_constraints12_IJFCS_2023.pdf2023-08-18 08:52 515K 
[ ]smallest_MUL_tree6_ISAAC2009.pdf2010-02-19 11:36 500K 
[ ]gc1626_GC2004.pdf2004-06-09 08:37 499K 
[ ]dyn_tries8_FSTTCS2007.pdf2007-11-30 16:53 478K 
[ ]d_rt_for_galled_via_trees3_AlCoB_2017.pdf2017-06-12 05:38 471K 
[ ]congested_clique_voronoi_diagram4_arXiv.pdf2024-04-10 13:48 443K 
[ ]connectivity_constraints7_CIAC_2021.pdf2021-05-08 08:40 442K 
[ ]periodic_gr_trav9_TCS_2012.pdf2012-06-29 02:46 435K 
[ ]path_frequency3_DAM_2012.pdf2012-04-27 07:26 426K 
[ ]population_protocols_labeling9_arXiv.pdf2021-12-22 06:53 423K 
[ ]graph_orient_w_splits4_ISCO_2018.pdf2018-07-22 13:45 415K 
[ ]forb_triplets7_JBCB2006.pdf2006-03-28 15:45 409K 
[ ]graph_orient_w_splits7_TCS_2020.pdf2020-10-20 16:21 405K 
[ ]ultra_succinct_tr1_SODA2007.pdf2007-08-28 04:29 400K 
[ ]d_rt_for_networks5_IWOCA_2019.pdf2019-07-16 13:56 398K 
[ ]repetition-bounded_LCS4_TCS_2020.pdf2020-08-26 16:37 390K 
[ ]RF_phylogenetic_netw8_IS_2012.pdf2012-03-26 04:12 388K 
[ ]improved_consensus_trees4_SODA_2013.pdf2012-12-19 03:24 385K 
[ ]fan_consistency5_RECOMB_2017.pdf2017-05-09 06:23 379K 
[ ]cyclic_covers8_WALCOM_2023.pdf2023-03-16 14:15 374K 
[ ]OMv_conj6_JCSS_2021.pdf2021-02-03 11:07 371K 
[ ]TANGO2_EMBnet_journal_2011.pdf2012-02-27 03:11 360K 
[ ]indexing_via_reference8_FAW-AAIM_2012.pdf2012-05-01 03:13 360K 
[ ]refining_gn3_RECOMB2005.pdf2005-05-11 08:35 357K 
[ ]graph_orient_w_edge_mod7_FAW_2019.pdf2019-04-17 11:52 353K 
[ ]graph_orient_opt_light_heavy9_JGAA_2015.pdf2015-10-02 04:23 351K 
[ ]MaxMinO8_IJFCS_2011.pdf2011-04-28 07:41 347K 
[ ]frequency_difference_c_t3_WABI_2013.pdf2013-08-26 04:51 343K 
[ ]AlCoB_2018_proceedings_preface.pdf2021-03-18 07:26 340K 
[ ]d_rt_for_galled_trees7_JDA_2014.pdf2014-02-28 07:48 329K 
[ ]buy-at-bulk_geom_netw9_IJFCS_2011.pdf2012-01-12 00:01 322K 
[ ]faster_R_star_c_t5_ISAAC_2014.pdf2014-12-09 07:03 317K 
[ ]ternary_triplets_consistency4_IWOCA_2024.pdf2024-06-26 05:37 314K 
[ ]unification_assoc_commutative4_IPEC_2014.pdf2014-12-09 07:03 309K 
[ ]repetition-bounded_LCS2_COCOA_2019.pdf2019-12-17 17:51 307K 
[ ]d_rt_for_caterpillars3_FCT_2021.pdf2021-09-13 02:39 307K 
[ ]triplets_to_gn7_SICOMP2006.pdf2006-03-17 05:38 306K 
[ ]graph_orient_min_path6_COCOON_2023.pdf2023-12-14 02:11 306K 
[ ]d_rt_for_galled_trees5_CPM_2012.pdf2012-06-21 08:12 303K 
[ ]lic.ps.Z2003-03-03 15:16 303K 
[ ]smallest_MUL_tree8_TCBB_2011.pdf2011-06-10 08:24 302K 
[ ]ipnrt8_TCS2006.pdf2006-10-11 06:00 298K 
[ ]periodic_gr_trav6_SIROCCO2009.pdf2010-03-09 13:12 296K 
[ ]co-MAST4_RECOMB2004.ps2005-09-05 11:14 293K 
[ ]RMSD_inexact4_AMB_2010.pdf2010-04-14 05:21 291K 
[ ]graph_orient_opt_light_heavy4_ISCO_2012.pdf2012-07-10 02:12 289K 
[ ]ultra_succinct_tr4_JCSS_2012.pdf2012-01-23 07:08 288K 
[ ]compressed_RAM4_arXiv.pdf2012-04-27 04:45 286K 
[ ]OMv_conj3_FAW_2019.pdf2019-04-17 11:53 285K 
[ ]R_star_consensus3_ESA_2010.pdf2010-09-15 08:14 275K 
[ ]023_GRACO2001.pdf2007-08-23 06:58 274K 
[ ]hcpSHORT2_SODA1999.pdf2004-09-23 03:34 271K 
[ ]minimally_resolved_tr8_SICOMP_2012.pdf2012-02-21 04:38 270K 
[ ]buy-at-bulk_geom_netw5_WADS2009.pdf2010-02-19 11:36 270K 
[ ]majority_rule_c_t2_RECOMB_2013.pdf2013-03-15 03:18 265K 
[ ]online_square4_MFCS2005.pdf2005-09-15 07:57 264K 
[ ]MaxMinO6_APDCM2009.pdf2010-02-19 11:41 258K 
[ ]compressed_RAM5_ICALP_2012.pdf2012-07-06 10:03 255K 
[ ]masn8_TCS2005.pdf2005-05-06 08:39 254K 
[ ]WLCS-journal08_Algorithmica2006.pdf2006-09-11 04:58 253K 
[ ]consensus_MUL-trees3_ISAAC_2011.pdf2012-01-27 16:25 253K 
[ ]recurrence_relation_p_n3_TAMC_2012.pdf2012-05-08 05:58 252K 
[ ]masp11_Algorithmica2005.pdf2006-01-02 07:22 252K 
[ ]minimally_resolved_tr5_WABI_2010.pdf2010-09-15 08:14 252K 
[ ]graph_orient_degree-constrained5_WAOA_2013.pdf2014-06-30 03:54 250K 
[ ]rectangulations_matr_mult3_ISAAC_2014.pdf2014-12-09 07:03 247K 
[ ]masn6_CATS2004.pdf2004-05-31 05:19 240K 
[ ]HClust4_JDA2004.pdf2004-05-23 18:39 238K 
[ ]nested7_ISAAC2004.pdf2004-12-19 19:11 236K 
[ ]WLCS-conf05_WABI2004.pdf2004-11-03 03:59 236K 
[ ]nested12_NTTCS2008_corrected090224.pdf2009-02-24 06:26 234K 
[ ]nested12_NTTCS2008_corrected.pdf2009-04-17 05:04 234K 
[ ]Encyclopedia_Algs_2016__pp_0048-0052.pdf2017-05-31 11:15 230K 
[ ]ordered_mast12_Algorithmica2007.pdf2007-07-17 06:38 230K 
[ ]ipnrt6_COCOON2004.pdf2004-11-03 03:59 229K 
[ ]approx_MTC3_CPM_2015.pdf2015-06-19 12:04 228K 
[ ]ordered_mast9_CPM2004.pdf2004-11-03 03:58 224K 
[ ]Encyclopedia_Algs2008__pp_644-647.pdf2016-11-28 09:11 219K 
[ ]triplets_to_gn4_SODA2005.pdf2005-03-07 14:05 212K 
[ ]masp7_LATIN2004.pdf2004-05-31 05:15 212K 
[ ]dist_ugn6_MFCS2005.pdf2005-09-16 09:05 210K 
[ ]RMSD_inexact2_WABI2009.pdf2010-02-19 11:36 208K 
[ ]RF_phylogenetic_netw4_CPM_2010.pdf2011-01-21 10:00 205K 
[ ]Encyclopedia_Algs2008__pp_246-248.pdf2016-11-28 09:11 199K 
[ ]lgsf5_JCB2006.pdf2006-05-23 06:45 196K 
[ ]hcp11_TR1999.ps1999-04-15 12:30 196K 
[ ]lgsf3_ISAAC2004.pdf2004-12-19 19:11 195K 
[ ]Encyclopedia_Algs_2016__pp_1564-1567.pdf2017-05-31 11:15 194K 
[ ]HClust1_CPM2000.pdf2004-06-10 17:07 182K 
[ ]ord4Plus_CATS1998.ps1999-04-15 12:29 176K 
[ ]RHTrav1_SIROCCO2005.pdf2005-05-17 03:16 175K 
[ ]align_trees6_FI2003.pdf2008-01-07 17:26 175K 
[ ]Encyclopedia_Algs2008__pp_651-653.pdf2016-11-28 09:11 174K 
[ ]Algorithms_editorial_2023_w_cover.pdf2023-05-19 09:59 173K 
[ ]succinct_b_v_rank_and_select7_SED2009.pdf2021-01-03 07:40 173K 
[ ]Encyclopedia_Algs_2016__pp_1550-1553.pdf2017-05-31 11:15 172K 
[ ]Algorithms_editorial_2023.pdf2023-03-30 16:30 170K 
[ ]Encyclopedia_Algs_2016__pp_0553-0556.pdf2017-05-31 11:15 169K 
[ ]rt_bpmr1_WAAC2007.pdf2016-03-18 02:18 166K 
[ ]Encyclopedia_Algs_2016__pp_1224-1227.pdf2017-05-31 11:15 158K 
[ ]Algorithms_editorial_2019.pdf2019-07-05 12:29 154K 
[ ]graph_orient_min_sum_penalty2_COMP_2011.pdf2012-02-02 12:18 152K 
[ ]FCT_2019_special_issue_JCSS_foreword_2021.pdf2021-05-08 08:40 150K 
[ ]align_trees4_CPM2001.pdf2004-06-10 17:08 139K 
[ ]unordered_tree_incl5_ICDE_2016.pdf2016-06-29 02:32 138K 
[ ]mecp5_CATS2006.pdf2006-01-23 08:07 137K 
[ ]forb_triplets4_APBC2005.pdf2005-03-03 09:52 121K 
[ ]MICT14_JOCO1999.pdf2004-05-23 18:44 111K 
[ ]Algorithms_editorial_2013.pdf2013-08-13 10:58 38K 
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